Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp6ap1Q9R1Q9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atp6ap1Q9R1Q9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Atp6ap1Q9R1Q9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Atp6ap1Q9R1Q9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp6ap1Q9R1Q9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.33■□□□□ 0.84
Atp6ap1Q9R1Q9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp6ap1Q9R1Q9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp6ap1Q9R1Q9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp6ap1Q9R1Q9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp6ap1Q9R1Q9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atp6ap1Q9R1Q9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atp6ap1Q9R1Q9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6ap1Q9R1Q9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6ap1Q9R1Q9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6ap1Q9R1Q9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Atp6ap1Q9R1Q9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6ap1Q9R1Q9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6ap1Q9R1Q9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms