Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh17Q9R100 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh17Q9R100 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh17Q9R100 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh17Q9R100 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.29■□□□□ 0.84
Cdh17Q9R100 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.29■□□□□ 0.84
Cdh17Q9R100 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Cdh17Q9R100 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh17Q9R100 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh17Q9R100 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cdh17Q9R100 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.28■□□□□ 0.84
Cdh17Q9R100 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh17Q9R100 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh17Q9R100 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh17Q9R100 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh17Q9R100 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.26■□□□□ 0.83
Cdh17Q9R100 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh17Q9R100 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh17Q9R100 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdh17Q9R100 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh17Q9R100 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh17Q9R100 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.22■□□□□ 0.83
Cdh17Q9R100 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh17Q9R100 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh17Q9R100 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.21■□□□□ 0.83
Cdh17Q9R100 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdh17Q9R100 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh17Q9R100 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdh17Q9R100 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cdh17Q9R100 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh17Q9R100 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms