Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.65■■□□□ 1.06
Nkx2-4Q9EQM3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-4Q9EQM3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-4Q9EQM3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-4Q9EQM3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-4Q9EQM3 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.64■■□□□ 1.06
Nkx2-4Q9EQM3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nkx2-4Q9EQM3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-4Q9EQM3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-4Q9EQM3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-4Q9EQM3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nkx2-4Q9EQM3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.63■■□□□ 1.05
Nkx2-4Q9EQM3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-4Q9EQM3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-4Q9EQM3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-4Q9EQM3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-4Q9EQM3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Gm40848-201ENSMUST00000221998 324 ntBASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-4Q9EQM3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-4Q9EQM3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Nkx2-4Q9EQM3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.59■■□□□ 1.05
Nkx2-4Q9EQM3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Gm7143-201ENSMUST00000222811 859 ntBASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Spcs1-204ENSMUST00000226782 949 ntBASIC21.58■■□□□ 1.05
Nkx2-4Q9EQM3 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-4Q9EQM3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-4Q9EQM3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-4Q9EQM3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Gm18671-201ENSMUST00000214826 683 ntBASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-4Q9EQM3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-4Q9EQM3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Nkx2-4Q9EQM3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-4Q9EQM3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Nkx2-4Q9EQM3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-4Q9EQM3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Nkx2-4Q9EQM3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
Nkx2-4Q9EQM3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.51■■□□□ 1.03
Nkx2-4Q9EQM3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-4Q9EQM3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms