Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20aQ9DC33 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20aQ9DC33 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20aQ9DC33 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20aQ9DC33 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20aQ9DC33 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20aQ9DC33 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20aQ9DC33 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20aQ9DC33 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20aQ9DC33 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20aQ9DC33 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20aQ9DC33 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20aQ9DC33 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Gm8503-201ENSMUST00000118131 455 ntBASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Hmg20aQ9DC33 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
Hmg20aQ9DC33 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 235.5 ms