Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf138Q9CQE0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf138Q9CQE0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.67■□□□□ 0.74
Rnf138Q9CQE0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf138Q9CQE0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf138Q9CQE0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138Q9CQE0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138Q9CQE0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.64■□□□□ 0.73
Rnf138Q9CQE0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf138Q9CQE0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf138Q9CQE0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf138Q9CQE0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138Q9CQE0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138Q9CQE0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138Q9CQE0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf138Q9CQE0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rnf138Q9CQE0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf138Q9CQE0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf138Q9CQE0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf138Q9CQE0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf138Q9CQE0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf138Q9CQE0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rnf138Q9CQE0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf138Q9CQE0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf138Q9CQE0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.58■□□□□ 0.72
Rnf138Q9CQE0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf138Q9CQE0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.57■□□□□ 0.72
Rnf138Q9CQE0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms