Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm43060-201ENSMUST00000200621 289 ntBASIC21.74■■□□□ 1.07
Cdh23Q99PF4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh23Q99PF4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdh23Q99PF4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cdh23Q99PF4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh23Q99PF4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdh23Q99PF4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh23Q99PF4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh23Q99PF4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cdh23Q99PF4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh23Q99PF4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh23Q99PF4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gm10033-202ENSMUST00000211874 928 ntBASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.68■■□□□ 1.06
Cdh23Q99PF4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh23Q99PF4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.67■■□□□ 1.06
Cdh23Q99PF4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh23Q99PF4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cdh23Q99PF4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh23Q99PF4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh23Q99PF4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh23Q99PF4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh23Q99PF4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh23Q99PF4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Cdh23Q99PF4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh23Q99PF4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cdh23Q99PF4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.64■■□□□ 1.06
Cdh23Q99PF4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh23Q99PF4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh23Q99PF4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.64■■□□□ 1.05
Cdh23Q99PF4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh23Q99PF4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms