Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca3Q99M54 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Cdca3Q99M54 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.17■□□□□ 0.66
Cdca3Q99M54 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.17■□□□□ 0.66
Cdca3Q99M54 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdca3Q99M54 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.17■□□□□ 0.66
Cdca3Q99M54 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.16■□□□□ 0.66
Cdca3Q99M54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdca3Q99M54 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdca3Q99M54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdca3Q99M54 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.15■□□□□ 0.66
Cdca3Q99M54 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdca3Q99M54 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdca3Q99M54 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdca3Q99M54 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca3Q99M54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca3Q99M54 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.13■□□□□ 0.65
Cdca3Q99M54 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdca3Q99M54 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdca3Q99M54 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca3Q99M54 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca3Q99M54 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca3Q99M54 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca3Q99M54 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdca3Q99M54 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.12■□□□□ 0.65
Cdca3Q99M54 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cdca3Q99M54 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.11■□□□□ 0.65
Cdca3Q99M54 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdca3Q99M54 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdca3Q99M54 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Gm22238-201ENSMUST00000175222 88 ntBASIC19.09■□□□□ 0.65
Cdca3Q99M54 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdca3Q99M54 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdca3Q99M54 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdca3Q99M54 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cdca3Q99M54 Gm21956-201ENSMUST00000179946 522 ntBASIC19.08■□□□□ 0.64
Cdca3Q99M54 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.08■□□□□ 0.64
Cdca3Q99M54 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdca3Q99M54 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.07■□□□□ 0.64
Cdca3Q99M54 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cdca3Q99M54 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdca3Q99M54 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdca3Q99M54 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdca3Q99M54 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms