Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan1Q99J59 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan1Q99J59 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan1Q99J59 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tspan1Q99J59 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tspan1Q99J59 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tspan1Q99J59 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tspan1Q99J59 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Tspan1Q99J59 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tspan1Q99J59 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.68■□□□□ 0.9
Tspan1Q99J59 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.68■□□□□ 0.9
Tspan1Q99J59 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan1Q99J59 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan1Q99J59 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan1Q99J59 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.67■□□□□ 0.9
Tspan1Q99J59 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan1Q99J59 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.66■□□□□ 0.9
Tspan1Q99J59 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.66■□□□□ 0.9
Tspan1Q99J59 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan1Q99J59 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan1Q99J59 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tspan1Q99J59 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tspan1Q99J59 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tspan1Q99J59 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Tspan1Q99J59 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan1Q99J59 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tspan1Q99J59 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan1Q99J59 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Tspan1Q99J59 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan1Q99J59 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan1Q99J59 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan1Q99J59 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan1Q99J59 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.61■□□□□ 0.89
Tspan1Q99J59 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
Tspan1Q99J59 Gm7143-201ENSMUST00000222811 859 ntBASIC20.61■□□□□ 0.89
Tspan1Q99J59 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tspan1Q99J59 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan1Q99J59 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan1Q99J59 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan1Q99J59 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.6■□□□□ 0.89
Tspan1Q99J59 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan1Q99J59 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan1Q99J59 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan1Q99J59 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan1Q99J59 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan1Q99J59 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan1Q99J59 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan1Q99J59 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tspan1Q99J59 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan1Q99J59 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms