Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx41Q91VN6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx41Q91VN6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx41Q91VN6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx41Q91VN6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx41Q91VN6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ddx41Q91VN6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx41Q91VN6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.72■■□□□ 1.39
Ddx41Q91VN6 Gm9847-201ENSMUST00000052528 599 ntBASIC23.72■■□□□ 1.39
Ddx41Q91VN6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Gm13241-201ENSMUST00000094493 780 ntBASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx41Q91VN6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx41Q91VN6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ddx41Q91VN6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx41Q91VN6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ddx41Q91VN6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ddx41Q91VN6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.7■■□□□ 1.38
Ddx41Q91VN6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx41Q91VN6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.69■■□□□ 1.38
Ddx41Q91VN6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx41Q91VN6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx41Q91VN6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx41Q91VN6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx41Q91VN6 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx41Q91VN6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx41Q91VN6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Gm21956-201ENSMUST00000179946 522 ntBASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx41Q91VN6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx41Q91VN6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.64■■□□□ 1.37
Ddx41Q91VN6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx41Q91VN6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx41Q91VN6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx41Q91VN6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx41Q91VN6 Gm12922-201ENSMUST00000120626 809 ntBASIC23.63■■□□□ 1.37
Ddx41Q91VN6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx41Q91VN6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ddx41Q91VN6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx41Q91VN6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx41Q91VN6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.62■■□□□ 1.37
Ddx41Q91VN6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx41Q91VN6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.62■■□□□ 1.37
Ddx41Q91VN6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.61■■□□□ 1.37
Ddx41Q91VN6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms