Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm1Q8VC85 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm1Q8VC85 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm1Q8VC85 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm1Q8VC85 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm1Q8VC85 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lsm1Q8VC85 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm1Q8VC85 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Lsm1Q8VC85 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm1Q8VC85 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.89■□□□□ 0.77
Lsm1Q8VC85 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lsm1Q8VC85 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm1Q8VC85 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm1Q8VC85 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lsm1Q8VC85 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm1Q8VC85 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Lsm1Q8VC85 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm1Q8VC85 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm1Q8VC85 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm1Q8VC85 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm1Q8VC85 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm1Q8VC85 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.83■□□□□ 0.77
Lsm1Q8VC85 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm1Q8VC85 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.83■□□□□ 0.77
Lsm1Q8VC85 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm1Q8VC85 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm1Q8VC85 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm1Q8VC85 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm1Q8VC85 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms