Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.95■□□□□ 0.62
Ebf4Q8K4J2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Mir3960-201ENSMUST00000198213 73 ntBASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Gm45364-201ENSMUST00000210883 159 ntBASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf4Q8K4J2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf4Q8K4J2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Ebf4Q8K4J2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ebf4Q8K4J2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ebf4Q8K4J2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Ebf4Q8K4J2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ebf4Q8K4J2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ebf4Q8K4J2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ebf4Q8K4J2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ebf4Q8K4J2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ebf4Q8K4J2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms