Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Aph1bQ8C7N7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Aph1bQ8C7N7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.64■□□□□ 0.9
Aph1bQ8C7N7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Aph1bQ8C7N7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1bQ8C7N7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1bQ8C7N7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1bQ8C7N7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Aph1bQ8C7N7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1bQ8C7N7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aph1bQ8C7N7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.58■□□□□ 0.89
Aph1bQ8C7N7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aph1bQ8C7N7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aph1bQ8C7N7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aph1bQ8C7N7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Aph1bQ8C7N7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1bQ8C7N7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1bQ8C7N7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1bQ8C7N7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms