Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.28■■□□□ 1.16
Fam78aQ8C552 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Fam78aQ8C552 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Fam78aQ8C552 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Fam78aQ8C552 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Fam78aQ8C552 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Fam78aQ8C552 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Fam78aQ8C552 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Fam78aQ8C552 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Fam78aQ8C552 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Fam78aQ8C552 Gm7143-201ENSMUST00000222811 859 ntBASIC22.25■■□□□ 1.15
Fam78aQ8C552 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Fam78aQ8C552 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam78aQ8C552 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Fam78aQ8C552 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.23■■□□□ 1.15
Fam78aQ8C552 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam78aQ8C552 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Mir7075-201ENSMUST00000184187 82 ntBASIC22.22■■□□□ 1.15
Fam78aQ8C552 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.22■■□□□ 1.15
Fam78aQ8C552 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam78aQ8C552 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Fam78aQ8C552 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Fam78aQ8C552 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Fam78aQ8C552 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Fam78aQ8C552 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Fam78aQ8C552 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Fam78aQ8C552 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.18■■□□□ 1.14
Fam78aQ8C552 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Fam78aQ8C552 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Fam78aQ8C552 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Fam78aQ8C552 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.16■■□□□ 1.14
Fam78aQ8C552 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.16■■□□□ 1.14
Fam78aQ8C552 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Fam78aQ8C552 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam78aQ8C552 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam78aQ8C552 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Fam78aQ8C552 Gm43017-201ENSMUST00000198296 752 ntBASIC22.15■■□□□ 1.14
Fam78aQ8C552 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam78aQ8C552 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam78aQ8C552 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
Fam78aQ8C552 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Fam78aQ8C552 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Fam78aQ8C552 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.14■■□□□ 1.13
Fam78aQ8C552 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Fam78aQ8C552 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam78aQ8C552 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Fam78aQ8C552 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Fam78aQ8C552 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Fam78aQ8C552 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.12■■□□□ 1.13
Fam78aQ8C552 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Fam78aQ8C552 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.12■■□□□ 1.13
Fam78aQ8C552 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Fam78aQ8C552 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Fam78aQ8C552 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms