Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Gm9959-201ENSMUST00000068277 390 ntBASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc9a4Q8BUE1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc9a4Q8BUE1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc9a4Q8BUE1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Slc9a4Q8BUE1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc9a4Q8BUE1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc9a4Q8BUE1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc9a4Q8BUE1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slc9a4Q8BUE1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slc9a4Q8BUE1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Etf1-202ENSMUST00000180351 108 ntBASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Gm7417-201ENSMUST00000192950 473 ntBASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc9a4Q8BUE1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Gm45102-201ENSMUST00000207427 857 ntBASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc9a4Q8BUE1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Rps24-207ENSMUST00000224568 714 ntBASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Slc9a4Q8BUE1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc9a4Q8BUE1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc9a4Q8BUE1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Gm14117-201ENSMUST00000122417 843 ntBASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc9a4Q8BUE1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Slc9a4Q8BUE1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc9a4Q8BUE1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc9a4Q8BUE1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.7■■□□□ 1.06
Slc9a4Q8BUE1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Slc9a4Q8BUE1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc9a4Q8BUE1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms