Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Scfd1Q8BRF7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Scfd1Q8BRF7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scfd1Q8BRF7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Scfd1Q8BRF7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scfd1Q8BRF7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Scfd1Q8BRF7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scfd1Q8BRF7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scfd1Q8BRF7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scfd1Q8BRF7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scfd1Q8BRF7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scfd1Q8BRF7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Scfd1Q8BRF7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Gm45417-201ENSMUST00000209533 758 ntBASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Scfd1Q8BRF7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scfd1Q8BRF7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scfd1Q8BRF7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scfd1Q8BRF7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scfd1Q8BRF7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scfd1Q8BRF7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scfd1Q8BRF7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.91■■□□□ 1.42
Scfd1Q8BRF7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scfd1Q8BRF7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scfd1Q8BRF7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Scfd1Q8BRF7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scfd1Q8BRF7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scfd1Q8BRF7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scfd1Q8BRF7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
Scfd1Q8BRF7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Scfd1Q8BRF7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Scfd1Q8BRF7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Scfd1Q8BRF7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.89■■□□□ 1.42
Scfd1Q8BRF7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Scfd1Q8BRF7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scfd1Q8BRF7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Scfd1Q8BRF7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scfd1Q8BRF7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scfd1Q8BRF7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scfd1Q8BRF7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scfd1Q8BRF7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scfd1Q8BRF7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scfd1Q8BRF7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scfd1Q8BRF7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scfd1Q8BRF7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scfd1Q8BRF7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scfd1Q8BRF7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scfd1Q8BRF7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scfd1Q8BRF7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scfd1Q8BRF7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.83■■□□□ 1.41
Scfd1Q8BRF7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scfd1Q8BRF7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.83■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms