Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Gm11175-201ENSMUST00000116172 543 ntBASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdhr3Q8BL00 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Cdhr3Q8BL00 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdhr3Q8BL00 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdhr3Q8BL00 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr3Q8BL00 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdhr3Q8BL00 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdhr3Q8BL00 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdhr3Q8BL00 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdhr3Q8BL00 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdhr3Q8BL00 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr3Q8BL00 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdhr3Q8BL00 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr3Q8BL00 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr3Q8BL00 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr3Q8BL00 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms