Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Tdp1Q8BJ37 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp1Q8BJ37 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp1Q8BJ37 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Tdp1Q8BJ37 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp1Q8BJ37 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp1Q8BJ37 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp1Q8BJ37 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp1Q8BJ37 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Gm43017-201ENSMUST00000198296 752 ntBASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.11■■□□□ 1.29
Tdp1Q8BJ37 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp1Q8BJ37 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Gm18284-201ENSMUST00000172604 624 ntBASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Gm8495-201ENSMUST00000188740 694 ntBASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Tdp1Q8BJ37 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp1Q8BJ37 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tdp1Q8BJ37 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.08■■□□□ 1.28
Tdp1Q8BJ37 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp1Q8BJ37 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.06■■□□□ 1.28
Tdp1Q8BJ37 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tdp1Q8BJ37 Gm8493-201ENSMUST00000196881 489 ntBASIC23.06■■□□□ 1.28
Tdp1Q8BJ37 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tdp1Q8BJ37 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp1Q8BJ37 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
Tdp1Q8BJ37 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tdp1Q8BJ37 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tdp1Q8BJ37 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tdp1Q8BJ37 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.04■■□□□ 1.28
Tdp1Q8BJ37 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms