Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Usp6nlQ80XC3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Usp6nlQ80XC3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Usp6nlQ80XC3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.1■■□□□ 1.29
Usp6nlQ80XC3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.1■■□□□ 1.29
Usp6nlQ80XC3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Gm43017-201ENSMUST00000198296 752 ntBASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp6nlQ80XC3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp6nlQ80XC3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Usp6nlQ80XC3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.08■■□□□ 1.29
Usp6nlQ80XC3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Usp6nlQ80XC3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Usp6nlQ80XC3 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.07■■□□□ 1.28
Usp6nlQ80XC3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Usp6nlQ80XC3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.07■■□□□ 1.28
Usp6nlQ80XC3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Usp6nlQ80XC3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Usp6nlQ80XC3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Usp6nlQ80XC3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp6nlQ80XC3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Usp6nlQ80XC3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp6nlQ80XC3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Usp6nlQ80XC3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Usp6nlQ80XC3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Gm8493-201ENSMUST00000196881 489 ntBASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Usp6nlQ80XC3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Usp6nlQ80XC3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp6nlQ80XC3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.01■■□□□ 1.27
Usp6nlQ80XC3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23■■□□□ 1.27
Usp6nlQ80XC3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp6nlQ80XC3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp6nlQ80XC3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Usp6nlQ80XC3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Gm43173-201ENSMUST00000202246 593 ntBASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp6nlQ80XC3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Usp6nlQ80XC3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms