Protein–RNA interactions for Protein: Q7TQA3

Sdr16c5, Epidermal retinol dehydrogenase 2, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdr16c5Q7TQA3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sdr16c5Q7TQA3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.49■□□□□ 0.87
Sdr16c5Q7TQA3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.49■□□□□ 0.87
Sdr16c5Q7TQA3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdr16c5Q7TQA3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sdr16c5Q7TQA3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sdr16c5Q7TQA3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdr16c5Q7TQA3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdr16c5Q7TQA3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdr16c5Q7TQA3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdr16c5Q7TQA3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sdr16c5Q7TQA3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdr16c5Q7TQA3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Sdr16c5Q7TQA3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdr16c5Q7TQA3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdr16c5Q7TQA3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdr16c5Q7TQA3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sdr16c5Q7TQA3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Sdr16c5Q7TQA3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdr16c5Q7TQA3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdr16c5Q7TQA3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdr16c5Q7TQA3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdr16c5Q7TQA3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdr16c5Q7TQA3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Sdr16c5Q7TQA3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms