Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
Rtl1Q7M732 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC37.68■■■■□ 3.62
Rtl1Q7M732 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Rtl1Q7M732 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Rtl1Q7M732 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC37.67■■■■□ 3.62
Rtl1Q7M732 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC37.67■■■■□ 3.62
Rtl1Q7M732 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC37.67■■■■□ 3.62
Rtl1Q7M732 AC164883.3-201ENSMUST00000227396 1774 ntBASIC37.66■■■■□ 3.62
Rtl1Q7M732 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Rtl1Q7M732 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Rtl1Q7M732 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Rtl1Q7M732 Gm13042-201ENSMUST00000119244 1955 ntBASIC37.66■■■■□ 3.62
Rtl1Q7M732 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Rtl1Q7M732 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC37.65■■■■□ 3.62
Rtl1Q7M732 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC37.65■■■■□ 3.62
Rtl1Q7M732 Kdm3b-204ENSMUST00000224715 2032 ntBASIC37.65■■■■□ 3.62
Rtl1Q7M732 Gm32051-202ENSMUST00000197905 2385 ntBASIC37.65■■■■□ 3.62
Rtl1Q7M732 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC37.65■■■■□ 3.62
Rtl1Q7M732 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC37.64■■■■□ 3.62
Rtl1Q7M732 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC37.64■■■■□ 3.62
Rtl1Q7M732 Gm43034-201ENSMUST00000198678 1364 ntBASIC37.63■■■■□ 3.62
Rtl1Q7M732 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Rtl1Q7M732 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Rtl1Q7M732 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC37.63■■■■□ 3.61
Rtl1Q7M732 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Rtl1Q7M732 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC37.62■■■■□ 3.61
Rtl1Q7M732 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC37.62■■■■□ 3.61
Rtl1Q7M732 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
Rtl1Q7M732 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC37.61■■■■□ 3.61
Rtl1Q7M732 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC37.61■■■■□ 3.61
Rtl1Q7M732 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Rtl1Q7M732 Gm27454-201ENSMUST00000185090 204 ntBASIC37.61■■■■□ 3.61
Rtl1Q7M732 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Rtl1Q7M732 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Rtl1Q7M732 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Gm15039-201ENSMUST00000118914 875 ntBASIC37.6■■■■□ 3.61
Rtl1Q7M732 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Rtl1Q7M732 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Rtl1Q7M732 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Rtl1Q7M732 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC37.58■■■■□ 3.61
Rtl1Q7M732 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC37.58■■■■□ 3.61
Rtl1Q7M732 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Rtl1Q7M732 AC140930.3-201ENSMUST00000222935 274 ntBASIC37.58■■■■□ 3.61
Rtl1Q7M732 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC37.57■■■■□ 3.61
Rtl1Q7M732 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
Rtl1Q7M732 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC37.57■■■■□ 3.61
Rtl1Q7M732 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC37.57■■■■□ 3.6
Rtl1Q7M732 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC37.57■■■■□ 3.6
Rtl1Q7M732 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC37.56■■■■□ 3.6
Rtl1Q7M732 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC37.56■■■■□ 3.6
Rtl1Q7M732 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Rtl1Q7M732 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC37.56■■■■□ 3.6
Rtl1Q7M732 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Rtl1Q7M732 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Rtl1Q7M732 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Rtl1Q7M732 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Rtl1Q7M732 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC37.52■■■■□ 3.6
Rtl1Q7M732 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC37.52■■■■□ 3.6
Rtl1Q7M732 Gm10657-201ENSMUST00000193528 1031 ntBASIC37.52■■■■□ 3.6
Rtl1Q7M732 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Rtl1Q7M732 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
Rtl1Q7M732 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Rtl1Q7M732 Gm4430-201ENSMUST00000192413 1943 ntBASIC37.51■■■■□ 3.6
Rtl1Q7M732 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Rtl1Q7M732 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Rtl1Q7M732 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC37.5■■■■□ 3.59
Rtl1Q7M732 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC37.5■■■■□ 3.59
Rtl1Q7M732 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Rtl1Q7M732 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC37.49■■■■□ 3.59
Rtl1Q7M732 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
Rtl1Q7M732 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC37.49■■■■□ 3.59
Rtl1Q7M732 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
Rtl1Q7M732 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Rtl1Q7M732 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC37.48■■■■□ 3.59
Rtl1Q7M732 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Rtl1Q7M732 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC37.48■■■■□ 3.59
Rtl1Q7M732 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC37.48■■■■□ 3.59
Rtl1Q7M732 Appbp2os-202ENSMUST00000206972 447 ntBASIC37.47■■■■□ 3.59
Rtl1Q7M732 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC37.47■■■■□ 3.59
Rtl1Q7M732 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Rtl1Q7M732 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC37.46■■■■□ 3.59
Rtl1Q7M732 Gm45417-201ENSMUST00000209533 758 ntBASIC37.46■■■■□ 3.59
Rtl1Q7M732 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms