Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx55Q6ZPL9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx55Q6ZPL9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx55Q6ZPL9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx55Q6ZPL9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx55Q6ZPL9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Ddx55Q6ZPL9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx55Q6ZPL9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Ddx55Q6ZPL9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx55Q6ZPL9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx55Q6ZPL9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.01■■□□□ 1.43
Ddx55Q6ZPL9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx55Q6ZPL9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx55Q6ZPL9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx55Q6ZPL9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx55Q6ZPL9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.99■■□□□ 1.43
Ddx55Q6ZPL9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx55Q6ZPL9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx55Q6ZPL9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.98■■□□□ 1.43
Ddx55Q6ZPL9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx55Q6ZPL9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx55Q6ZPL9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ddx55Q6ZPL9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx55Q6ZPL9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx55Q6ZPL9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx55Q6ZPL9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx55Q6ZPL9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx55Q6ZPL9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ddx55Q6ZPL9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx55Q6ZPL9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx55Q6ZPL9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Ddx55Q6ZPL9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx55Q6ZPL9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.94■■□□□ 1.42
Ddx55Q6ZPL9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.94■■□□□ 1.42
Ddx55Q6ZPL9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Ddx55Q6ZPL9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.94■■□□□ 1.42
Ddx55Q6ZPL9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 Gm7291-201ENSMUST00000199147 382 ntBASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.93■■□□□ 1.42
Ddx55Q6ZPL9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.92■■□□□ 1.42
Ddx55Q6ZPL9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx55Q6ZPL9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ddx55Q6ZPL9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx55Q6ZPL9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx55Q6ZPL9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Spcs1-204ENSMUST00000226782 949 ntBASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx55Q6ZPL9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Gm26833-201ENSMUST00000180899 440 ntBASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Ddx55Q6ZPL9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ddx55Q6ZPL9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Gm26571-201ENSMUST00000181399 666 ntBASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms