Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Casc4Q6P2L7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Casc4Q6P2L7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21■□□□□ 0.95
Casc4Q6P2L7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21■□□□□ 0.95
Casc4Q6P2L7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Casc4Q6P2L7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.99■□□□□ 0.95
Casc4Q6P2L7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc4Q6P2L7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc4Q6P2L7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Casc4Q6P2L7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Gm10399-202ENSMUST00000202768 748 ntBASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Casc4Q6P2L7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Casc4Q6P2L7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casc4Q6P2L7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.96■□□□□ 0.95
Casc4Q6P2L7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Casc4Q6P2L7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Casc4Q6P2L7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc4Q6P2L7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.94■□□□□ 0.94
Casc4Q6P2L7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.94■□□□□ 0.94
Casc4Q6P2L7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Casc4Q6P2L7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Casc4Q6P2L7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Etf1-202ENSMUST00000180351 108 ntBASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Casc4Q6P2L7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Casc4Q6P2L7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Rps24-207ENSMUST00000224568 714 ntBASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Casc4Q6P2L7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc4Q6P2L7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc4Q6P2L7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Casc4Q6P2L7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Casc4Q6P2L7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc4Q6P2L7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.89■□□□□ 0.93
Casc4Q6P2L7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Casc4Q6P2L7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Casc4Q6P2L7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Casc4Q6P2L7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms