Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Scube3Q66PY1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scube3Q66PY1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Scube3Q66PY1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scube3Q66PY1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scube3Q66PY1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scube3Q66PY1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scube3Q66PY1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scube3Q66PY1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.85■■□□□ 1.09
Scube3Q66PY1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scube3Q66PY1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Gm22238-201ENSMUST00000175222 88 ntBASIC21.84■■□□□ 1.09
Scube3Q66PY1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scube3Q66PY1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.83■■□□□ 1.09
Scube3Q66PY1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.83■■□□□ 1.09
Scube3Q66PY1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.83■■□□□ 1.09
Scube3Q66PY1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scube3Q66PY1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Scube3Q66PY1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.83■■□□□ 1.09
Scube3Q66PY1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scube3Q66PY1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scube3Q66PY1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.82■■□□□ 1.08
Scube3Q66PY1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.82■■□□□ 1.08
Scube3Q66PY1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scube3Q66PY1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scube3Q66PY1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scube3Q66PY1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scube3Q66PY1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scube3Q66PY1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
Scube3Q66PY1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Scube3Q66PY1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
Scube3Q66PY1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube3Q66PY1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube3Q66PY1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube3Q66PY1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scube3Q66PY1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scube3Q66PY1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube3Q66PY1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube3Q66PY1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scube3Q66PY1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Scube3Q66PY1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scube3Q66PY1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Scube3Q66PY1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scube3Q66PY1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Scube3Q66PY1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube3Q66PY1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.76■■□□□ 1.07
Scube3Q66PY1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube3Q66PY1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scube3Q66PY1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube3Q66PY1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube3Q66PY1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube3Q66PY1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms