Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic3Q62521 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic3Q62521 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic3Q62521 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.45■□□□□ 0.38
Zic3Q62521 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic3Q62521 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic3Q62521 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.44■□□□□ 0.38
Zic3Q62521 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Zic3Q62521 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Zic3Q62521 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zic3Q62521 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zic3Q62521 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zic3Q62521 Gm15546-201ENSMUST00000122095 826 ntBASIC17.43■□□□□ 0.38
Zic3Q62521 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zic3Q62521 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zic3Q62521 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zic3Q62521 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zic3Q62521 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zic3Q62521 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zic3Q62521 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.42■□□□□ 0.38
Zic3Q62521 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zic3Q62521 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zic3Q62521 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Zic3Q62521 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.41■□□□□ 0.38
Zic3Q62521 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.41■□□□□ 0.38
Zic3Q62521 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zic3Q62521 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zic3Q62521 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zic3Q62521 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zic3Q62521 Gm15820-201ENSMUST00000201566 728 ntBASIC17.4■□□□□ 0.38
Zic3Q62521 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zic3Q62521 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Zic3Q62521 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zic3Q62521 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zic3Q62521 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zic3Q62521 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zic3Q62521 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zic3Q62521 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zic3Q62521 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zic3Q62521 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zic3Q62521 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Zic3Q62521 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Zic3Q62521 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.39■□□□□ 0.37
Zic3Q62521 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zic3Q62521 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Zic3Q62521 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.38■□□□□ 0.37
Zic3Q62521 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.38■□□□□ 0.37
Zic3Q62521 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Zic3Q62521 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.38■□□□□ 0.37
Zic3Q62521 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Zic3Q62521 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Zic3Q62521 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Zic3Q62521 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.37■□□□□ 0.37
Zic3Q62521 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.37■□□□□ 0.37
Zic3Q62521 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zic3Q62521 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Zic3Q62521 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zic3Q62521 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zic3Q62521 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zic3Q62521 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Zic3Q62521 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.36■□□□□ 0.37
Zic3Q62521 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zic3Q62521 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zic3Q62521 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Zic3Q62521 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.35■□□□□ 0.37
Zic3Q62521 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Zic3Q62521 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.35■□□□□ 0.37
Zic3Q62521 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.35■□□□□ 0.37
Zic3Q62521 Gm40881-201ENSMUST00000223397 166 ntBASIC17.35■□□□□ 0.37
Zic3Q62521 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zic3Q62521 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms