Protein–RNA interactions for Protein: Q5HZH2

Tsr3, Ribosome biogenesis protein TSR3 homolog, mousemouse

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr3Q5HZH2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsr3Q5HZH2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tsr3Q5HZH2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsr3Q5HZH2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tsr3Q5HZH2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tsr3Q5HZH2 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.39■□□□□ 0.54
Tsr3Q5HZH2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tsr3Q5HZH2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tsr3Q5HZH2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tsr3Q5HZH2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.36■□□□□ 0.53
Tsr3Q5HZH2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tsr3Q5HZH2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.36■□□□□ 0.53
Tsr3Q5HZH2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Tsr3Q5HZH2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Tsr3Q5HZH2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Gm10232-201ENSMUST00000089221 720 ntBASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tsr3Q5HZH2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.34■□□□□ 0.53
Tsr3Q5HZH2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tsr3Q5HZH2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.33■□□□□ 0.53
Tsr3Q5HZH2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Gm10399-202ENSMUST00000202768 748 ntBASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tsr3Q5HZH2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.32■□□□□ 0.52
Tsr3Q5HZH2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tsr3Q5HZH2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tsr3Q5HZH2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms