Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
R3hdm4Q4VBF2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
R3hdm4Q4VBF2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
R3hdm4Q4VBF2 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.51■■□□□ 1.19
R3hdm4Q4VBF2 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.51■■□□□ 1.19
R3hdm4Q4VBF2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3hdm4Q4VBF2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3hdm4Q4VBF2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
R3hdm4Q4VBF2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
R3hdm4Q4VBF2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.49■■□□□ 1.19
R3hdm4Q4VBF2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
R3hdm4Q4VBF2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
R3hdm4Q4VBF2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.47■■□□□ 1.19
R3hdm4Q4VBF2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.47■■□□□ 1.19
R3hdm4Q4VBF2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
R3hdm4Q4VBF2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
R3hdm4Q4VBF2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
R3hdm4Q4VBF2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
R3hdm4Q4VBF2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
R3hdm4Q4VBF2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.43■■□□□ 1.18
R3hdm4Q4VBF2 Gm22238-201ENSMUST00000175222 88 ntBASIC22.43■■□□□ 1.18
R3hdm4Q4VBF2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
R3hdm4Q4VBF2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
R3hdm4Q4VBF2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
R3hdm4Q4VBF2 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms