Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Fam196aQ3USH1 AV356131-201ENSMUST00000206201 750 ntBASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Gm10602-201ENSMUST00000098239 609 ntBASIC21.16■□□□□ 0.98
Fam196aQ3USH1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fam196aQ3USH1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.15■□□□□ 0.98
Fam196aQ3USH1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.15■□□□□ 0.98
Fam196aQ3USH1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fam196aQ3USH1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fam196aQ3USH1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Fam196aQ3USH1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fam196aQ3USH1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fam196aQ3USH1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fam196aQ3USH1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fam196aQ3USH1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Fam196aQ3USH1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Gm10033-202ENSMUST00000211874 928 ntBASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fam196aQ3USH1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.11■□□□□ 0.97
Fam196aQ3USH1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fam196aQ3USH1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.11■□□□□ 0.97
Fam196aQ3USH1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Fam196aQ3USH1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam196aQ3USH1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam196aQ3USH1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fam196aQ3USH1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fam196aQ3USH1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.08■□□□□ 0.97
Fam196aQ3USH1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fam196aQ3USH1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.08■□□□□ 0.97
Fam196aQ3USH1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Fam196aQ3USH1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam196aQ3USH1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam196aQ3USH1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.08■□□□□ 0.96
Fam196aQ3USH1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Fam196aQ3USH1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam196aQ3USH1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam196aQ3USH1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam196aQ3USH1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam196aQ3USH1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam196aQ3USH1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam196aQ3USH1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Fam196aQ3USH1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam196aQ3USH1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.04■□□□□ 0.96
Fam196aQ3USH1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Gm42778-201ENSMUST00000199644 553 ntBASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam196aQ3USH1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam196aQ3USH1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms