Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt6aP50446 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Krt6aP50446 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Gm11175-201ENSMUST00000116172 543 ntBASIC20.59■□□□□ 0.89
Krt6aP50446 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.59■□□□□ 0.89
Krt6aP50446 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.59■□□□□ 0.89
Krt6aP50446 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.59■□□□□ 0.89
Krt6aP50446 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt6aP50446 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Krt6aP50446 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt6aP50446 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt6aP50446 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Krt6aP50446 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.58■□□□□ 0.88
Krt6aP50446 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt6aP50446 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt6aP50446 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt6aP50446 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Krt6aP50446 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Krt6aP50446 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Krt6aP50446 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt6aP50446 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt6aP50446 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt6aP50446 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt6aP50446 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.57■□□□□ 0.88
Krt6aP50446 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Krt6aP50446 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt6aP50446 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Krt6aP50446 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Krt6aP50446 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.56■□□□□ 0.88
Krt6aP50446 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt6aP50446 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Krt6aP50446 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt6aP50446 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt6aP50446 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt6aP50446 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt6aP50446 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt6aP50446 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.55■□□□□ 0.88
Krt6aP50446 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.54■□□□□ 0.88
Krt6aP50446 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Krt6aP50446 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Krt6aP50446 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Krt6aP50446 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Krt6aP50446 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt6aP50446 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt6aP50446 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Krt6aP50446 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Krt6aP50446 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Krt6aP50446 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Krt6aP50446 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Krt6aP50446 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Krt6aP50446 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Krt6aP50446 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Krt6aP50446 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.51■□□□□ 0.87
Krt6aP50446 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.51■□□□□ 0.87
Krt6aP50446 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt6aP50446 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.5■□□□□ 0.87
Krt6aP50446 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt6aP50446 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt6aP50446 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt6aP50446 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt6aP50446 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Krt6aP50446 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt6aP50446 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Krt6aP50446 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Krt6aP50446 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Krt6aP50446 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.49■□□□□ 0.87
Krt6aP50446 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt6aP50446 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.48■□□□□ 0.87
Krt6aP50446 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms