Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.74■□□□□ 0.27
Cd27P41272 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd27P41272 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.74■□□□□ 0.27
Cd27P41272 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cd27P41272 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cd27P41272 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd27P41272 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd27P41272 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd27P41272 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cd27P41272 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd27P41272 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.71■□□□□ 0.27
Cd27P41272 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd27P41272 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cd27P41272 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd27P41272 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Cd27P41272 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd27P41272 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cd27P41272 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cd27P41272 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd27P41272 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.7■□□□□ 0.26
Cd27P41272 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.7■□□□□ 0.26
Cd27P41272 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.7■□□□□ 0.26
Cd27P41272 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd27P41272 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd27P41272 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd27P41272 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd27P41272 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd27P41272 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cd27P41272 Gm14117-201ENSMUST00000122417 843 ntBASIC16.68■□□□□ 0.26
Cd27P41272 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.68■□□□□ 0.26
Cd27P41272 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.68■□□□□ 0.26
Cd27P41272 Gm45102-201ENSMUST00000207427 857 ntBASIC16.68■□□□□ 0.26
Cd27P41272 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.68■□□□□ 0.26
Cd27P41272 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.68■□□□□ 0.26
Cd27P41272 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.68■□□□□ 0.26
Cd27P41272 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Cd27P41272 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd27P41272 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 Etf1-202ENSMUST00000180351 108 ntBASIC16.67■□□□□ 0.26
Cd27P41272 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd27P41272 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cd27P41272 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
Cd27P41272 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cd27P41272 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.66■□□□□ 0.26
Cd27P41272 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cd27P41272 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd27P41272 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd27P41272 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd27P41272 Rps24-207ENSMUST00000224568 714 ntBASIC16.65■□□□□ 0.26
Cd27P41272 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd27P41272 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd27P41272 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd27P41272 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Cd27P41272 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.64■□□□□ 0.25
Cd27P41272 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd27P41272 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.64■□□□□ 0.25
Cd27P41272 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd27P41272 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd27P41272 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.63■□□□□ 0.25
Cd27P41272 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
Cd27P41272 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.63■□□□□ 0.25
Cd27P41272 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms