Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Slc6a13P31649 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Slc6a13P31649 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc6a13P31649 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.18■□□□□ 0.98
Slc6a13P31649 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.18■□□□□ 0.98
Slc6a13P31649 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Slc6a13P31649 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a13P31649 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a13P31649 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slc6a13P31649 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc6a13P31649 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a13P31649 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.17■□□□□ 0.98
Slc6a13P31649 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a13P31649 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a13P31649 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slc6a13P31649 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a13P31649 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.16■□□□□ 0.98
Slc6a13P31649 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.16■□□□□ 0.98
Slc6a13P31649 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.16■□□□□ 0.98
Slc6a13P31649 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a13P31649 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Slc6a13P31649 Gm40881-201ENSMUST00000223397 166 ntBASIC21.15■□□□□ 0.98
Slc6a13P31649 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a13P31649 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a13P31649 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.14■□□□□ 0.97
Slc6a13P31649 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a13P31649 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.14■□□□□ 0.97
Slc6a13P31649 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a13P31649 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a13P31649 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.13■□□□□ 0.97
Slc6a13P31649 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.13■□□□□ 0.97
Slc6a13P31649 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.13■□□□□ 0.97
Slc6a13P31649 Gm9959-201ENSMUST00000068277 390 ntBASIC21.13■□□□□ 0.97
Slc6a13P31649 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a13P31649 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.12■□□□□ 0.97
Slc6a13P31649 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a13P31649 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a13P31649 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a13P31649 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a13P31649 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a13P31649 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a13P31649 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a13P31649 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc6a13P31649 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Slc6a13P31649 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Slc6a13P31649 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a13P31649 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.1■□□□□ 0.97
Slc6a13P31649 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Slc6a13P31649 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a13P31649 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a13P31649 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a13P31649 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a13P31649 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc6a13P31649 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a13P31649 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a13P31649 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.09■□□□□ 0.97
Slc6a13P31649 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a13P31649 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a13P31649 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a13P31649 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Slc6a13P31649 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a13P31649 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Slc6a13P31649 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a13P31649 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a13P31649 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Slc6a13P31649 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a13P31649 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc6a13P31649 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc6a13P31649 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Slc6a13P31649 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a13P31649 Etf1-202ENSMUST00000180351 108 ntBASIC21.05■□□□□ 0.96
Slc6a13P31649 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms