Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd40lgP27548 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Cd40lgP27548 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cd40lgP27548 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd40lgP27548 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd40lgP27548 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd40lgP27548 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd40lgP27548 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd40lgP27548 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
Cd40lgP27548 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.01■□□□□ 0.63
Cd40lgP27548 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40lgP27548 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40lgP27548 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40lgP27548 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cd40lgP27548 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40lgP27548 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd40lgP27548 Gm10399-202ENSMUST00000202768 748 ntBASIC19■□□□□ 0.63
Cd40lgP27548 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Cd40lgP27548 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd40lgP27548 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd40lgP27548 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd40lgP27548 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cd40lgP27548 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd40lgP27548 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40lgP27548 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cd40lgP27548 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40lgP27548 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.99■□□□□ 0.63
Cd40lgP27548 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.99■□□□□ 0.63
Cd40lgP27548 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40lgP27548 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40lgP27548 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd40lgP27548 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd40lgP27548 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cd40lgP27548 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.98■□□□□ 0.63
Cd40lgP27548 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd40lgP27548 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cd40lgP27548 Gm7417-201ENSMUST00000192950 473 ntBASIC18.97■□□□□ 0.63
Cd40lgP27548 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.97■□□□□ 0.63
Cd40lgP27548 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd40lgP27548 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cd40lgP27548 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cd40lgP27548 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cd40lgP27548 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.96■□□□□ 0.63
Cd40lgP27548 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.96■□□□□ 0.63
Cd40lgP27548 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40lgP27548 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40lgP27548 Gm45102-201ENSMUST00000207427 857 ntBASIC18.96■□□□□ 0.63
Cd40lgP27548 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd40lgP27548 Gm9959-201ENSMUST00000068277 390 ntBASIC18.96■□□□□ 0.63
Cd40lgP27548 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cd40lgP27548 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.95■□□□□ 0.62
Cd40lgP27548 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.95■□□□□ 0.62
Cd40lgP27548 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.95■□□□□ 0.62
Cd40lgP27548 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cd40lgP27548 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd40lgP27548 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Cd40lgP27548 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Cd40lgP27548 Gm14117-201ENSMUST00000122417 843 ntBASIC18.94■□□□□ 0.62
Cd40lgP27548 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.94■□□□□ 0.62
Cd40lgP27548 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40lgP27548 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd40lgP27548 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.93■□□□□ 0.62
Cd40lgP27548 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.93■□□□□ 0.62
Cd40lgP27548 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.93■□□□□ 0.62
Cd40lgP27548 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cd40lgP27548 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd40lgP27548 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40lgP27548 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.92■□□□□ 0.62
Cd40lgP27548 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd40lgP27548 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 192.8 ms