Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.74■□□□□ 0.43
Cldn1O88551 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn1O88551 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.73■□□□□ 0.43
Cldn1O88551 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn1O88551 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Gm43137-201ENSMUST00000198052 594 ntBASIC17.73■□□□□ 0.43
Cldn1O88551 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.73■□□□□ 0.43
Cldn1O88551 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Cldn1O88551 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn1O88551 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldn1O88551 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn1O88551 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn1O88551 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.72■□□□□ 0.43
Cldn1O88551 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn1O88551 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cldn1O88551 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn1O88551 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn1O88551 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.71■□□□□ 0.43
Cldn1O88551 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldn1O88551 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cldn1O88551 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.71■□□□□ 0.43
Cldn1O88551 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.71■□□□□ 0.43
Cldn1O88551 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.71■□□□□ 0.43
Cldn1O88551 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn1O88551 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn1O88551 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn1O88551 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.7■□□□□ 0.42
Cldn1O88551 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Mir7075-201ENSMUST00000184187 82 ntBASIC17.7■□□□□ 0.42
Cldn1O88551 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Cldn1O88551 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.7■□□□□ 0.42
Cldn1O88551 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn1O88551 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.69■□□□□ 0.42
Cldn1O88551 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 Gm5874-201ENSMUST00000096101 508 ntBASIC17.69■□□□□ 0.42
Cldn1O88551 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cldn1O88551 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn1O88551 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Cldn1O88551 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cldn1O88551 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn1O88551 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn1O88551 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.67■□□□□ 0.42
Cldn1O88551 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn1O88551 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn1O88551 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn1O88551 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldn1O88551 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn1O88551 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn1O88551 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cldn1O88551 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn1O88551 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cldn1O88551 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn1O88551 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cldn1O88551 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn1O88551 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn1O88551 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms