Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh16O88338 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdh16O88338 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh16O88338 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh16O88338 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh16O88338 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdh16O88338 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.27■□□□□ 0.84
Cdh16O88338 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh16O88338 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh16O88338 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdh16O88338 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Cdh16O88338 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh16O88338 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh16O88338 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Cdh16O88338 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh16O88338 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh16O88338 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh16O88338 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cdh16O88338 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh16O88338 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh16O88338 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh16O88338 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdh16O88338 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh16O88338 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Scarna2-201ENSMUST00000157560 414 ntBASIC20.23■□□□□ 0.83
Cdh16O88338 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdh16O88338 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cdh16O88338 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh16O88338 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
Cdh16O88338 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.22■□□□□ 0.83
Cdh16O88338 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh16O88338 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdh16O88338 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.21■□□□□ 0.83
Cdh16O88338 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdh16O88338 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh16O88338 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh16O88338 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.2■□□□□ 0.82
Cdh16O88338 Gm44428-201ENSMUST00000204474 874 ntBASIC20.2■□□□□ 0.82
Cdh16O88338 Gm16437-201ENSMUST00000025669 507 ntBASIC20.2■□□□□ 0.82
Cdh16O88338 Gm9806-201ENSMUST00000051080 552 ntBASIC20.2■□□□□ 0.82
Cdh16O88338 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdh16O88338 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh16O88338 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cdh16O88338 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh16O88338 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh16O88338 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh16O88338 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cdh16O88338 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.19■□□□□ 0.82
Cdh16O88338 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.18■□□□□ 0.82
Cdh16O88338 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cdh16O88338 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cdh16O88338 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh16O88338 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh16O88338 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh16O88338 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cdh16O88338 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdh16O88338 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh16O88338 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh16O88338 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh16O88338 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 918.7 ms