Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ttc3O88196 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ttc3O88196 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.14■■□□□ 1.13
Ttc3O88196 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ttc3O88196 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc3O88196 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc3O88196 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc3O88196 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.12■■□□□ 1.13
Ttc3O88196 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ttc3O88196 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc3O88196 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.11■■□□□ 1.13
Ttc3O88196 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ttc3O88196 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc3O88196 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ttc3O88196 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc3O88196 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.1■■□□□ 1.13
Ttc3O88196 Serp2-204ENSMUST00000228055 705 ntBASIC22.1■■□□□ 1.13
Ttc3O88196 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc3O88196 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc3O88196 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc3O88196 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
Ttc3O88196 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc3O88196 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
Ttc3O88196 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.09■■□□□ 1.13
Ttc3O88196 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc3O88196 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc3O88196 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ttc3O88196 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ttc3O88196 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc3O88196 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.07■■□□□ 1.12
Ttc3O88196 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.07■■□□□ 1.12
Ttc3O88196 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc3O88196 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Ttc3O88196 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc3O88196 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc3O88196 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc3O88196 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc3O88196 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.06■■□□□ 1.12
Ttc3O88196 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc3O88196 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.06■■□□□ 1.12
Ttc3O88196 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc3O88196 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 Gm9870-201ENSMUST00000063874 645 ntBASIC22.05■■□□□ 1.12
Ttc3O88196 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ttc3O88196 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc3O88196 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc3O88196 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.04■■□□□ 1.12
Ttc3O88196 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Ttc3O88196 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ttc3O88196 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc3O88196 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ttc3O88196 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.03■■□□□ 1.12
Ttc3O88196 Gm7143-201ENSMUST00000222811 859 ntBASIC22.03■■□□□ 1.12
Ttc3O88196 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Ttc3O88196 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc3O88196 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc3O88196 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.03■■□□□ 1.12
Ttc3O88196 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc3O88196 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ttc3O88196 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc3O88196 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.02■■□□□ 1.12
Ttc3O88196 Gm43137-201ENSMUST00000198052 594 ntBASIC22.02■■□□□ 1.12
Ttc3O88196 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc3O88196 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ttc3O88196 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Ttc3O88196 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc3O88196 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Ttc3O88196 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.01■■□□□ 1.11
Ttc3O88196 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
Ttc3O88196 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc3O88196 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ttc3O88196 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms