Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
Gm17535J3KMR8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
Gm17535J3KMR8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Gm13241-201ENSMUST00000094493 780 ntBASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm17535J3KMR8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Gm9870-201ENSMUST00000063874 645 ntBASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.29■■□□□ 1.16
Gm17535J3KMR8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Gm17535J3KMR8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Golgb1-201ENSMUST00000023534 498 ntBASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm17535J3KMR8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm17535J3KMR8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm17535J3KMR8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.25■■□□□ 1.15
Gm17535J3KMR8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm17535J3KMR8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm17535J3KMR8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Gm17535J3KMR8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm17535J3KMR8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm17535J3KMR8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Gm7143-201ENSMUST00000222811 859 ntBASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.23■■□□□ 1.15
Gm17535J3KMR8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.22■■□□□ 1.15
Gm17535J3KMR8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Gm17535J3KMR8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm17535J3KMR8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm17535J3KMR8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.2■■□□□ 1.14
Gm17535J3KMR8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm17535J3KMR8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm17535J3KMR8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm17535J3KMR8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.18■■□□□ 1.14
Gm17535J3KMR8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.18■■□□□ 1.14
Gm17535J3KMR8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm17535J3KMR8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms