Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a5A6H584 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Col6a5A6H584 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Col6a5A6H584 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.12■□□□□ 0.17
Col6a5A6H584 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.12■□□□□ 0.17
Col6a5A6H584 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.12■□□□□ 0.17
Col6a5A6H584 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a5A6H584 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Smad6-203ENSMUST00000179458 273 ntBASIC16.11■□□□□ 0.17
Col6a5A6H584 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.11■□□□□ 0.17
Col6a5A6H584 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a5A6H584 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.11■□□□□ 0.17
Col6a5A6H584 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.11■□□□□ 0.17
Col6a5A6H584 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Gm12527-201ENSMUST00000117967 564 ntBASIC16.1■□□□□ 0.17
Col6a5A6H584 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a5A6H584 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.09■□□□□ 0.17
Col6a5A6H584 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col6a5A6H584 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.09■□□□□ 0.17
Col6a5A6H584 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Col6a5A6H584 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.09■□□□□ 0.17
Col6a5A6H584 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col6a5A6H584 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a5A6H584 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a5A6H584 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a5A6H584 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a5A6H584 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.08■□□□□ 0.17
Col6a5A6H584 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a5A6H584 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Col6a5A6H584 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a5A6H584 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a5A6H584 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.08■□□□□ 0.16
Col6a5A6H584 Gm20760-201ENSMUST00000179197 648 ntBASIC16.08■□□□□ 0.16
Col6a5A6H584 Gm42778-201ENSMUST00000199644 553 ntBASIC16.08■□□□□ 0.16
Col6a5A6H584 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.08■□□□□ 0.16
Col6a5A6H584 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Col6a5A6H584 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Col6a5A6H584 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a5A6H584 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a5A6H584 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.07■□□□□ 0.16
Col6a5A6H584 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.07■□□□□ 0.16
Col6a5A6H584 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a5A6H584 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.06■□□□□ 0.16
Col6a5A6H584 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.06■□□□□ 0.16
Col6a5A6H584 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col6a5A6H584 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Col6a5A6H584 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a5A6H584 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col6a5A6H584 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.05■□□□□ 0.16
Col6a5A6H584 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Col6a5A6H584 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.05■□□□□ 0.16
Col6a5A6H584 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a5A6H584 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col6a5A6H584 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a5A6H584 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col6a5A6H584 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a5A6H584 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.04■□□□□ 0.16
Col6a5A6H584 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a5A6H584 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col6a5A6H584 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.03■□□□□ 0.16
Col6a5A6H584 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a5A6H584 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.03■□□□□ 0.16
Col6a5A6H584 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a5A6H584 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a5A6H584 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a5A6H584 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a5A6H584 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a5A6H584 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col6a5A6H584 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.02■□□□□ 0.15
Col6a5A6H584 Gm12441-201ENSMUST00000121806 588 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms