Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim17A0A504 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim17A0A504 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smim17A0A504 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim17A0A504 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.77■□□□□ 0.6
Smim17A0A504 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smim17A0A504 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.77■□□□□ 0.59
Smim17A0A504 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smim17A0A504 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim17A0A504 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smim17A0A504 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim17A0A504 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.76■□□□□ 0.59
Smim17A0A504 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smim17A0A504 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim17A0A504 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smim17A0A504 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim17A0A504 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim17A0A504 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim17A0A504 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.75■□□□□ 0.59
Smim17A0A504 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim17A0A504 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smim17A0A504 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.75■□□□□ 0.59
Smim17A0A504 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smim17A0A504 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim17A0A504 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim17A0A504 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.74■□□□□ 0.59
Smim17A0A504 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim17A0A504 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smim17A0A504 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Smim17A0A504 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smim17A0A504 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smim17A0A504 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Smim17A0A504 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim17A0A504 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim17A0A504 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smim17A0A504 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim17A0A504 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smim17A0A504 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smim17A0A504 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim17A0A504 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smim17A0A504 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim17A0A504 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.72■□□□□ 0.59
Smim17A0A504 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim17A0A504 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Smim17A0A504 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smim17A0A504 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Smim17A0A504 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smim17A0A504 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smim17A0A504 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
Smim17A0A504 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.71■□□□□ 0.59
Smim17A0A504 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smim17A0A504 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.71■□□□□ 0.59
Smim17A0A504 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim17A0A504 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smim17A0A504 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.7■□□□□ 0.58
Smim17A0A504 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.7■□□□□ 0.58
Smim17A0A504 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim17A0A504 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smim17A0A504 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smim17A0A504 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smim17A0A504 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.69■□□□□ 0.58
Smim17A0A504 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smim17A0A504 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.69■□□□□ 0.58
Smim17A0A504 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim17A0A504 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.68■□□□□ 0.58
Smim17A0A504 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.68■□□□□ 0.58
Smim17A0A504 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smim17A0A504 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.68■□□□□ 0.58
Smim17A0A504 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smim17A0A504 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms