Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Serp2-204ENSMUST00000228055 705 ntBASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl13a-ps1A0A140T8K2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.27■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl13a-ps1A0A140T8K2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms