Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv29A0A0G2LB96 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv29A0A0G2LB96 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trbv29A0A0G2LB96 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv29A0A0G2LB96 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Gm14523-201ENSMUST00000117260 558 ntBASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv29A0A0G2LB96 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
Trbv29A0A0G2LB96 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Gm27502-201ENSMUST00000183495 199 ntBASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv29A0A0G2LB96 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv29A0A0G2LB96 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv29A0A0G2LB96 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trbv29A0A0G2LB96 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv29A0A0G2LB96 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv29A0A0G2LB96 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms