Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.23■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav15d-2-dv6d-2A0A0G2JGQ7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav15d-2-dv6d-2A0A0G2JGQ7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms