Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ighv1-78A0A0G2JGN3 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-78A0A0G2JGN3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.66■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-78A0A0G2JGN3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.64■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-78A0A0G2JGN3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-78A0A0G2JGN3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-78A0A0G2JGN3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms