Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-42A0A0A6YY38 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.33■□□□□ 0.68
Ighv1-42A0A0A6YY38 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-42A0A0A6YY38 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ighv1-42A0A0A6YY38 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-42A0A0A6YY38 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-42A0A0A6YY38 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-42A0A0A6YY38 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-42A0A0A6YY38 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.28■□□□□ 0.68
Ighv1-42A0A0A6YY38 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-42A0A0A6YY38 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-42A0A0A6YY38 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-42A0A0A6YY38 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-42A0A0A6YY38 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Ighv1-42A0A0A6YY38 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-42A0A0A6YY38 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-42A0A0A6YY38 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Serp2-204ENSMUST00000228055 705 ntBASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-42A0A0A6YY38 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-42A0A0A6YY38 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-42A0A0A6YY38 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-42A0A0A6YY38 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-42A0A0A6YY38 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms