Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv23A0A0A6YWQ1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm12366-201ENSMUST00000121722 873 ntBASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm5786-201ENSMUST00000085368 882 ntBASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv23A0A0A6YWQ1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm14523-201ENSMUST00000117260 558 ntBASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv23A0A0A6YWQ1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv23A0A0A6YWQ1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv23A0A0A6YWQ1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv23A0A0A6YWQ1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm7332-201ENSMUST00000118351 454 ntBASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv23A0A0A6YWQ1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv23A0A0A6YWQ1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv23A0A0A6YWQ1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms