Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-4A0A075B6B4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6-4A0A075B6B4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-4A0A075B6B4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-4A0A075B6B4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-4A0A075B6B4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-4A0A075B6B4 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-4A0A075B6B4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-4A0A075B6B4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav6-4A0A075B6B4 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.95■□□□□ 0.14
Trav6-4A0A075B6B4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-4A0A075B6B4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-4A0A075B6B4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-4A0A075B6B4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Gm40881-201ENSMUST00000223397 166 ntBASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-4A0A075B6B4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Trav6-4A0A075B6B4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-4A0A075B6B4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms