Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav17A0A075B655 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav17A0A075B655 Gm9806-201ENSMUST00000051080 552 ntBASIC16.46■□□□□ 0.23
Trav17A0A075B655 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.46■□□□□ 0.23
Trav17A0A075B655 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav17A0A075B655 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav17A0A075B655 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Scarna2-201ENSMUST00000157560 414 ntBASIC16.44■□□□□ 0.22
Trav17A0A075B655 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav17A0A075B655 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav17A0A075B655 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Gm16437-201ENSMUST00000025669 507 ntBASIC16.42■□□□□ 0.22
Trav17A0A075B655 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav17A0A075B655 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.41■□□□□ 0.22
Trav17A0A075B655 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav17A0A075B655 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav17A0A075B655 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.4■□□□□ 0.22
Trav17A0A075B655 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav17A0A075B655 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav17A0A075B655 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Gm11687-201ENSMUST00000118911 886 ntBASIC16.38■□□□□ 0.21
Trav17A0A075B655 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav17A0A075B655 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms