Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav10A0A075B642 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10A0A075B642 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav10A0A075B642 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trav10A0A075B642 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10A0A075B642 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav10A0A075B642 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav10A0A075B642 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav10A0A075B642 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav10A0A075B642 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav10A0A075B642 Gm10232-201ENSMUST00000089221 720 ntBASIC18.4■□□□□ 0.54
Trav10A0A075B642 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav10A0A075B642 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10A0A075B642 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav10A0A075B642 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav10A0A075B642 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav10A0A075B642 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.37■□□□□ 0.53
Trav10A0A075B642 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav10A0A075B642 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav10A0A075B642 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav10A0A075B642 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav10A0A075B642 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav10A0A075B642 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav10A0A075B642 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav10A0A075B642 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.34■□□□□ 0.53
Trav10A0A075B642 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav10A0A075B642 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.33■□□□□ 0.53
Trav10A0A075B642 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10A0A075B642 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10A0A075B642 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav10A0A075B642 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.33■□□□□ 0.53
Trav10A0A075B642 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav10A0A075B642 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav10A0A075B642 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav10A0A075B642 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.33■□□□□ 0.52
Trav10A0A075B642 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms