Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.42■■□□□ 1.02
Gm5538W4VSP6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5538W4VSP6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5538W4VSP6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5538W4VSP6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5538W4VSP6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5538W4VSP6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5538W4VSP6 Gm10232-201ENSMUST00000089221 720 ntBASIC21.4■■□□□ 1.02
Gm5538W4VSP6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5538W4VSP6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
Gm5538W4VSP6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm5538W4VSP6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm5538W4VSP6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm5538W4VSP6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.39■■□□□ 1.01
Gm5538W4VSP6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm5538W4VSP6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5538W4VSP6 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.37■■□□□ 1.01
Gm5538W4VSP6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5538W4VSP6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.36■■□□□ 1.01
Gm5538W4VSP6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5538W4VSP6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5538W4VSP6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Gm5538W4VSP6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm5538W4VSP6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.33■■□□□ 1
Gm5538W4VSP6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm5538W4VSP6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm5538W4VSP6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm5538W4VSP6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm5538W4VSP6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gm5538W4VSP6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.32■■□□□ 1
Gm5538W4VSP6 Gm15820-201ENSMUST00000201566 728 ntBASIC21.32■■□□□ 1
Gm5538W4VSP6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.31■■□□□ 1
Gm5538W4VSP6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm5538W4VSP6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
Gm5538W4VSP6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5538W4VSP6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm5538W4VSP6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm5538W4VSP6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.3■■□□□ 1
Gm5538W4VSP6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm5538W4VSP6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5538W4VSP6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5538W4VSP6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5538W4VSP6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5538W4VSP6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5538W4VSP6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.29■■□□□ 1
Gm5538W4VSP6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.29■■□□□ 1
Gm5538W4VSP6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5538W4VSP6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms