Protein–RNA interactions for Protein: Q9JJS6

Bco1, Beta,beta-carotene 15,15'-dioxygenase, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bco1Q9JJS6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bco1Q9JJS6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.46■□□□□ 0.71
Bco1Q9JJS6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bco1Q9JJS6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bco1Q9JJS6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Bco1Q9JJS6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Bco1Q9JJS6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.44■□□□□ 0.7
Bco1Q9JJS6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.44■□□□□ 0.7
Bco1Q9JJS6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bco1Q9JJS6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bco1Q9JJS6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.43■□□□□ 0.7
Bco1Q9JJS6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Bco1Q9JJS6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.41■□□□□ 0.7
Bco1Q9JJS6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bco1Q9JJS6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bco1Q9JJS6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bco1Q9JJS6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Bco1Q9JJS6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Bco1Q9JJS6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.38■□□□□ 0.69
Bco1Q9JJS6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.38■□□□□ 0.69
Bco1Q9JJS6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bco1Q9JJS6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bco1Q9JJS6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bco1Q9JJS6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bco1Q9JJS6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bco1Q9JJS6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Bco1Q9JJS6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms