Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Gm12251-201ENSMUST00000117893 792 ntBASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-4Q9EQM3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-4Q9EQM3 Gm10493-201ENSMUST00000097270 612 ntBASIC21.78■■□□□ 1.08
Nkx2-4Q9EQM3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-4Q9EQM3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-4Q9EQM3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Nkx2-4Q9EQM3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-4Q9EQM3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-4Q9EQM3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nkx2-4Q9EQM3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nkx2-4Q9EQM3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Gm42642-201ENSMUST00000200683 355 ntBASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-4Q9EQM3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-4Q9EQM3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-4Q9EQM3 Gm26833-201ENSMUST00000180899 440 ntBASIC21.74■■□□□ 1.07
Nkx2-4Q9EQM3 Gm37179-201ENSMUST00000194862 823 ntBASIC21.74■■□□□ 1.07
Nkx2-4Q9EQM3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.74■■□□□ 1.07
Nkx2-4Q9EQM3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-4Q9EQM3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-4Q9EQM3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Gm43060-201ENSMUST00000200621 289 ntBASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-4Q9EQM3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-4Q9EQM3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Nkx2-4Q9EQM3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-4Q9EQM3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-4Q9EQM3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-4Q9EQM3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Gm10849-201ENSMUST00000100397 618 ntBASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Nkx2-4Q9EQM3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nkx2-4Q9EQM3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms