Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim11Q99PQ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim11Q99PQ2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim11Q99PQ2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim11Q99PQ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim11Q99PQ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim11Q99PQ2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim11Q99PQ2 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.8■■□□□ 1.4
Trim11Q99PQ2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim11Q99PQ2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim11Q99PQ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
Trim11Q99PQ2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim11Q99PQ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Trim11Q99PQ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim11Q99PQ2 Gm45444-201ENSMUST00000211394 898 ntBASIC23.77■■□□□ 1.4
Trim11Q99PQ2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim11Q99PQ2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim11Q99PQ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.76■■□□□ 1.39
Trim11Q99PQ2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.76■■□□□ 1.39
Trim11Q99PQ2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim11Q99PQ2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim11Q99PQ2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Trim11Q99PQ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Trim11Q99PQ2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Trim11Q99PQ2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim11Q99PQ2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim11Q99PQ2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim11Q99PQ2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim11Q99PQ2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim11Q99PQ2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim11Q99PQ2 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.7■■□□□ 1.38
Trim11Q99PQ2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim11Q99PQ2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms